{ "_id": "6a26dd8424555f66ed52774d", "Package": "biostats", "Title": "Biostatistics and Clinical Data Analysis", "Version": "1.1.2", "Authors@R": "c(\nperson(\"Sebastian\", \"Quirarte-Justo\",\nemail = \"sebastian.quirarte@sophia.com.mx\",\nrole = c(\"aut\", \"cre\"),\ncomment = c(ORCID = \"0009-0004-2730-4343\")),\nperson(\"Angela Carolina\", \"Montano-Ruiz\",\nemail = \"angela.montano@sophia.com.mx\",\nrole = \"aut\",\ncomment = c(ORCID = \"0009-0009-1705-763X\")),\nperson(\"Jose Maria\", \"Torres-Arellano\",\nemail = \"jose.torres@sophia.com.mx\",\nrole = \"aut\",\ncomment = c(ORCID = \"0000-0003-4632-2243\")),\nperson(\"Laboratorios Sophia S.A. de C.V.\",\nrole = c(\"cph\", \"fnd\")))", "Description": "Biostatistical and clinical data analysis, including\ndescriptive statistics, exploratory data analysis, sample size\nand power calculations, statistical inference, and data\nvisualization. Normality tests are implemented following Mishra\net al. (2019) , omnibus test\nprocedures are based on Blanca et al. (2017)\n and Field et al. (2012,\nISBN:9781446200469), while sample size and power calculation\nmethods follow Chow et al. (2017) .", "License": "MIT + file LICENSE", "Encoding": "UTF-8", "Roxygen": "list(markdown = TRUE)", "RoxygenNote": "7.3.3", "Config/testthat/edition": "3", "URL": "https://github.com/sebasquirarte/biostats", "BugReports": "https://github.com/sebasquirarte/biostats/issues", "Config/pak/sysreqs": "cmake make libicu-dev libuv1-dev libxml2-dev\nlibssl-dev libnode-dev", "Repository": "https://sebasquirarte.r-universe.dev", "Date/Publication": "2026-06-08 14:55:13 UTC", "RemoteUrl": "https://github.com/sebasquirarte/biostats", "RemoteRef": "HEAD", "RemoteSha": "cdc564d5466d4fc710588b4f7b9bc22178db5113", "NeedsCompilation": "no", "Packaged": { "Date": "2026-06-08 15:15:18 UTC", "User": "root" }, "Author": "Sebastian Quirarte-Justo [aut, cre] (ORCID:\n),\nAngela Carolina Montano-Ruiz [aut] (ORCID:\n),\nJose Maria Torres-Arellano [aut] (ORCID:\n),\nLaboratorios Sophia S.A. de C.V. [cph, fnd]", "Maintainer": "Sebastian Quirarte-Justo ", "MD5sum": "1ae42ab3587c6889f7e11a0c153d79c5", "_user": "sebasquirarte", "_type": "src", "_file": "biostats_1.1.2.tar.gz", "_fileid": "cef45137ac4ba8aaf7cf6d84af37518a95aae94cec43df64a3d1889c7f08b81e", "_filesize": 2139482, "_sha256": "cef45137ac4ba8aaf7cf6d84af37518a95aae94cec43df64a3d1889c7f08b81e", "_created": "2026-06-08T15:15:18.000Z", "_published": "2026-06-08T15:19:32.353Z", "_distro": "noble", "_jobs": [ { "job": 80129502705, "time": 205, "config": "linux-devel-x86_64", "r": "4.7.0", "check": "OK", "artifact": "7484599959" }, { "job": 80129502638, "time": 198, "config": "linux-release-x86_64", "r": "4.6.0", "check": "OK", "artifact": "7484596385" }, { "job": 80129502665, "time": 195, "config": "macos-oldrel-arm64", "r": "4.5.3", "check": "OK", "artifact": "7484580501" }, { "job": 80129502571, "time": 221, "config": "macos-release-arm64", "r": "4.6.0", "check": "OK", "artifact": "7484585500" }, { "job": 80128713298, "time": 207, "config": "source", "r": "4.6.0", "check": "OK", "artifact": "7484507801" }, { "job": 80129502639, "time": 154, "config": "wasm-release", "r": "4.6.0", "check": "OK", "artifact": "7484576459" }, { "job": 80129502589, "time": 132, "config": "windows-devel", "r": "4.7.0", "check": "OK", "artifact": "7484567835" }, { "job": 80129502676, "time": 137, "config": "windows-oldrel", "r": "4.5.3", "check": "OK", "artifact": "7484569037" }, { "job": 80129502790, "time": 123, "config": "windows-release", "r": "4.6.0", "check": "OK", "artifact": "7484563279" } ], "_buildurl": "https://github.com/r-universe/sebasquirarte/actions/runs/27147340643", "_status": "success", "_host": "GitHub-Actions", "_upstream": "https://github.com/sebasquirarte/biostats", "_commit": { "id": "cdc564d5466d4fc710588b4f7b9bc22178db5113", "author": "sebasquirarte ", "committer": "sebasquirarte ", "message": "Update README\n", "time": 1780930513 }, "_maintainer": { "name": "Sebastian Quirarte-Justo", "email": "sebastian.quirarte@sophia.com.mx" }, "_registered": true, "_dependencies": [ { "package": "R", "version": ">= 4.1.0", "role": "Depends" }, { "package": "ggplot2", "role": "Imports" }, { "package": "gridExtra", "role": "Imports" }, { "package": "rlang", "role": "Imports" }, { "package": "car", "role": "Imports" }, { "package": "gt", "role": "Imports" }, { "package": "nortest", "role": "Imports" }, { "package": "testthat", "version": ">= 3.0.0", "role": "Suggests" }, { "package": "covr", "role": "Suggests" } ], "_owner": "sebasquirarte", "_selfowned": true, "_usedby": 0, "_updates": [ { "week": "2025-30", "n": 14 }, { "week": "2025-31", "n": 1 }, { "week": "2025-32", "n": 13 }, { "week": "2025-33", "n": 24 }, { "week": "2025-34", "n": 32 }, { "week": "2025-35", "n": 50 }, { "week": "2025-36", "n": 10 }, { "week": "2025-37", "n": 3 }, { "week": "2025-38", "n": 3 }, { "week": "2025-45", "n": 9 }, { "week": "2025-46", "n": 13 }, { "week": "2025-47", "n": 3 }, { "week": "2025-49", "n": 5 }, { "week": "2025-50", "n": 5 }, { "week": "2026-03", "n": 1 }, { "week": "2026-04", "n": 1 }, { "week": "2026-05", "n": 1 }, { "week": "2026-10", "n": 3 }, { "week": "2026-14", "n": 2 }, { "week": "2026-17", "n": 1 }, { "week": "2026-24", "n": 1 } ], "_tags": [ { "name": "v1.0.0", "date": "2025-11-18" }, { "name": "v1.1.0", "date": "2025-12-05" }, { "name": "v1.1.1", "date": "2025-12-08" }, { "name": "v1.1.2", "date": "2026-03-06" } ], "_topics": [ "biostatistics", "clinical-data", "clinical-research", "clinical-trials" ], "_stars": 85, "_contributors": [ { "user": "sebasquirarte", "count": 187, "uuid": 39809366 }, { "user": "angelacmon", "count": 46, "uuid": 209810841 }, { "user": "jmta-rgb", "count": 2, "uuid": 209810955 } ], "_userbio": { "uuid": 39809366, "type": "user", "name": "Sebastian Quirarte", "description": "Biostatistics and clinical data analysis. Passionate about machine learning and its medical applications. R and Python." }, "_downloads": { "count": 304, "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/biostats" }, "_devurl": "https://github.com/sebasquirarte/biostats", "_searchresults": 5, "_rbuild": "4.6.0", "_assets": [ "extra/biostats.html", "extra/citation.cff", "extra/citation.html", "extra/citation.json", "extra/citation.txt", "extra/contents.json", "extra/NEWS.html", "extra/NEWS.txt", "extra/readme.html", "extra/readme.md", "manual.pdf" ], "_homeurl": "https://github.com/sebasquirarte/biostats", "_realowner": "sebasquirarte", "_cranurl": true, "_releases": [ { "version": "1.0.0", "date": "2025-11-13" }, { "version": "1.1.0", "date": "2025-12-11" }, { "version": "1.1.1", "date": "2025-12-16" }, { "version": "1.1.2", "date": "2026-03-05" } ], "_exports": [ "clinical_data", "effect_measures", "missing_values", "normality", "omnibus", "outliers", "plot_bar", "plot_box", "plot_corr", "plot_hist", "plot_line", "sample_size", "sample_size_range", "summary_table" ], "_help": [ { "page": "clinical_data", "title": "Simulate Simple Clinical Trial Data", "topics": [ "clinical_data" ] }, { "page": "effect_measures", "title": "Effect Measures", "topics": [ "effect_measures", "print.effect_measures" ] }, { "page": "missing_values", "title": "Descriptive and Visual Missing Value Assessment", "topics": [ "missing_values", "print.missing_values", "print.outliers" ] }, { "page": "normality", "title": "Statistical and Visual Normality Assessment", "topics": [ "normality", "print.normality" ] }, { "page": "omnibus", "title": "Omnibus Tests for Comparing Three or More Groups", "topics": [ "omnibus", "print.omnibus" ] }, { "page": "outliers", "title": "Descriptive and Visual Outlier Assessment", "topics": [ "outliers" ] }, { "page": "plot_bar", "title": "Create Simple Professional Bar Plots", "topics": [ "plot_bar" ] }, { "page": "plot_box", "title": "Create Simple Professional Box Plots", "topics": [ "plot_box" ] }, { "page": "plot_corr", "title": "Create Simple Professional Correlation Matrix Plots", "topics": [ "plot_corr" ] }, { "page": "plot_hist", "title": "Create Simple Professional Histogram Plots", "topics": [ "plot_hist" ] }, { "page": "plot_line", "title": "Create Simple Professional Line Plots", "topics": [ "plot_line" ] }, { "page": "sample_size", "title": "Sample Size Calculation for Clinical Trials", "topics": [ "print.sample_size", "sample_size" ] }, { "page": "sample_size_range", "title": "Calculate and visualize sample size across a range of treatment effects", "topics": [ "print.sample_size_range", "sample_size_range" ] }, { "page": "summary_table", "title": "Summary Table with Optional Group Comparisons", "topics": [ "summary_table" ] } ], "_pkglogo": "https://github.com/sebasquirarte/biostats/raw/HEAD/man/figures/logo.png", "_readme": "https://github.com/sebasquirarte/biostats/raw/HEAD/README.md", "_rundeps": [ "abind", "backports", "base64enc", "bigD", "bitops", "boot", "broom", "bslib", "cachem", "car", "carData", "cli", "colorspace", "commonmark", "cowplot", "cpp11", "curl", "Deriv", "digest", "doBy", "dplyr", "evaluate", "farver", "fastmap", "fontawesome", "forecast", "Formula", "fracdiff", "fs", "generics", "ggplot2", "glue", "gridExtra", "gt", "gtable", "highr", "htmltools", "htmlwidgets", "isoband", "jquerylib", "jsonlite", "juicyjuice", "knitr", "labeling", "lattice", "lifecycle", "litedown", "lme4", "lmtest", "magrittr", "markdown", "MASS", "Matrix", "MatrixModels", "memoise", "mgcv", "microbenchmark", "mime", "minqa", "modelr", "nlme", "nloptr", "nnet", "nortest", "numDeriv", "pbkrtest", "pillar", "pkgconfig", "purrr", "quantreg", "R6", "rappdirs", "rbibutils", "RColorBrewer", "Rcpp", "RcppArmadillo", "RcppEigen", "Rdpack", "reactable", "reactR", "reformulas", "rlang", "rmarkdown", "S7", "sass", "scales", "SparseM", "stringi", "stringr", "survival", "tibble", "tidyr", "tidyselect", "timeDate", "tinytex", "urca", "utf8", "V8", "vctrs", "viridisLite", "withr", "xfun", "xml2", "yaml", "zoo" ], "_score": 6.251638220448212, "_indexed": true, "_nocasepkg": "biostats", "_universes": [ "sebasquirarte" ], "_binaries": [ { "r": "4.7.0", "os": "linux", "version": "1.1.2", "date": "2026-06-08T15:18:13.000Z", "distro": "noble", "commit": "cdc564d5466d4fc710588b4f7b9bc22178db5113", "fileid": "19043ba31988dadf00aea3971854f64acc47edabc4efea1b280d418e0edb15b1", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/sebasquirarte/actions/runs/27147340643" }, { "r": "4.6.0", "os": "linux", "version": "1.1.2", "date": "2026-06-08T15:18:03.000Z", "distro": "noble", "commit": "cdc564d5466d4fc710588b4f7b9bc22178db5113", "fileid": "f630e66ecc8f5c0652342ed1495e86594ef3528d39415f5108c4b61a30f3e912", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/sebasquirarte/actions/runs/27147340643" }, { "r": "4.5.3", "os": "mac", "version": "1.1.2", "date": "2026-06-08T15:17:40.000Z", "commit": "cdc564d5466d4fc710588b4f7b9bc22178db5113", "fileid": "cd6e2cbae17e3aa6ea9f2921f3f0d3df470a97ae04281aa1d736108c76473f28", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/sebasquirarte/actions/runs/27147340643" }, { "r": "4.6.0", "os": "mac", "version": "1.1.2", "date": "2026-06-08T15:17:34.000Z", "commit": "cdc564d5466d4fc710588b4f7b9bc22178db5113", "fileid": "68531e119d720bc375a547e3492fd8a9ccb5a896263af2c0e36ef55a05e3f6b1", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/sebasquirarte/actions/runs/27147340643" }, { "r": "4.6.0", "os": "wasm", "version": "1.1.2", "date": "2026-06-08T15:18:08.000Z", "commit": "cdc564d5466d4fc710588b4f7b9bc22178db5113", "fileid": "b195cb95279ade41cb24313b25ffc91a6c90baa31fe37405aafa1cde40add4da", "status": "success", "buildurl": "https://github.com/r-universe/sebasquirarte/actions/runs/27147340643" }, { "r": "4.7.0", "os": "win", "version": "1.1.2", "date": "2026-06-08T15:16:51.000Z", "commit": "cdc564d5466d4fc710588b4f7b9bc22178db5113", "fileid": "f36af5d7ac64f980a336949a59a8379144491981b8782606fbf990ccbd6f373a", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/sebasquirarte/actions/runs/27147340643" }, { "r": "4.5.3", "os": "win", "version": "1.1.2", "date": "2026-06-08T15:16:45.000Z", "commit": "cdc564d5466d4fc710588b4f7b9bc22178db5113", "fileid": "e1b12619b22b35eb85893350458a8217756c4866b3d4a7029083e9d503440324", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/sebasquirarte/actions/runs/27147340643" }, { "r": "4.6.0", "os": "win", "version": "1.1.2", "date": "2026-06-08T15:16:37.000Z", "commit": "cdc564d5466d4fc710588b4f7b9bc22178db5113", "fileid": "45b5bcf5348a3968c5c98edc0506c801f9c06f3502b95658e19a7c14c37d2ef2", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/sebasquirarte/actions/runs/27147340643" } ] }